Bugfix #2402 main_v11.0 sonarqube #2447
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…is bugfix branch. DO NOT include these changes in the pull request for main_v11.0.
… run manually for this bugfix branch on seneca I'm just using a local copy with changes rather than this version that lives in the repo.
… hopefully avoid SonarQube findings.
…memory with std::vector to avoid SonarQube findings about out of bounds memory access.
…tead of dyanmically allocating memory to avoid SonarQube findings.
…ead of dynamically allocating memory to eliminate SonarQube findings.
…narQube finding.
…cally allocated memory to get rid of SonarQube findings.
…ly allocated memory.
…vector instead of dynamically allocating memory to avoid SonarQube findings.
…used a runtime memory error in MODE.
…nitialize Nalloc to 0 to avoid segfault.
…mber of elements rather than the number of allocated elements after switching to using vectors.
…naged memory to avoid SonarQube issues.
…ime errors in MODE.
22 tasks
…ead of doing an element by element assignment.
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Proceeding with the merge without an external reviewer. Looking in this GHA run, all of the unit tests run without error, but differences are flagged. After creating the MET-11.0.1-rc1 release, I will update main_v11.0-ref to get past the differences described below.
This difference is being handled by issue #2452. |
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Co-authored-by: MET Tools Test Account <[email protected]> Co-authored-by: Howard Soh <[email protected]> Co-authored-by: jprestop <[email protected]> Co-authored-by: hsoh-u <[email protected]> Co-authored-by: George McCabe <[email protected]> fix #2389 main_v11.0 flowchart (#2391) fix definitions of G172 and G220 based on comments in NOAA-EMC/NCEPLIBS-w3emc#157. (#2405) fix #2380 main_v11.0 override (#2381) fix #2408 main_v11.0 empty config (#2409) fix #2390 main_v11.0 fix compiling hdf5 with zlib and handle NetCDF-C zip (#2403) fix #2415 main_v11.0 modulefiles (#2416) fix #2412 main_v11.0 climo (#2420) fix #2426 main_v11.0 buoy (#2432) fix #2437 main_v11.0 convert (#2438) fix for main_v11.0, for #2437, forgot one reference to the search_parent for a dictionary lookup. fix 2428 python from env main v11.0 (#2443) fix 2428 python csv input (#2450) fix #2452 main_v11.0 airnow (#2453) fix #2402 main_v11.0 sonarqube (First PR) (#2447)
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Co-authored-by: MET Tools Test Account <[email protected]> Co-authored-by: Howard Soh <[email protected]> Co-authored-by: John Halley Gotway <[email protected]> Co-authored-by: jprestop <[email protected]> Co-authored-by: hsoh-u <[email protected]> Co-authored-by: George McCabe <[email protected]> fix #2389 main_v11.0 flowchart (#2391) fix definitions of G172 and G220 based on comments in NOAA-EMC/NCEPLIBS-w3emc#157. (#2405) fix #2380 main_v11.0 override (#2381) fix #2408 main_v11.0 empty config (#2409) fix #2390 main_v11.0 fix compiling hdf5 with zlib and handle NetCDF-C zip (#2403) fix #2415 main_v11.0 modulefiles (#2416) fix #2412 main_v11.0 climo (#2420) fix #2426 main_v11.0 buoy (#2432) fix #2437 main_v11.0 convert (#2438) fix for main_v11.0, for #2437, forgot one reference to the search_parent for a dictionary lookup. fix 2428 python from env main v11.0 (#2443) fix 2428 python csv input (#2450) fix #2452 main_v11.0 airnow (#2453) fix #2402 main_v11.0 sonarqube (First PR) (#2447) fix #2449 main_v11.0 pdf (#2465) fix 2428 python csv input (#2467)
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Co-authored-by: MET Tools Test Account <[email protected]> Co-authored-by: Howard Soh <[email protected]> Co-authored-by: John Halley Gotway <[email protected]> Co-authored-by: jprestop <[email protected]> Co-authored-by: hsoh-u <[email protected]> Co-authored-by: George McCabe <[email protected]> fix #2389 main_v11.0 flowchart (#2391) fix definitions of G172 and G220 based on comments in NOAA-EMC/NCEPLIBS-w3emc#157. (#2405) fix #2380 main_v11.0 override (#2381) fix #2408 main_v11.0 empty config (#2409) fix #2390 main_v11.0 fix compiling hdf5 with zlib and handle NetCDF-C zip (#2403) fix #2415 main_v11.0 modulefiles (#2416) fix #2412 main_v11.0 climo (#2420) fix #2426 main_v11.0 buoy (#2432) fix #2437 main_v11.0 convert (#2438) fix for main_v11.0, for #2437, forgot one reference to the search_parent for a dictionary lookup. fix 2428 python from env main v11.0 (#2443) fix 2428 python csv input (#2450) fix #2452 main_v11.0 airnow (#2453) fix #2402 main_v11.0 sonarqube (First PR) (#2447) fix #2449 main_v11.0 pdf (#2465) fix 2428 python csv input (#2467)
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Co-authored-by: MET Tools Test Account <[email protected]> Co-authored-by: Howard Soh <[email protected]> Co-authored-by: John Halley Gotway <[email protected]> Co-authored-by: jprestop <[email protected]> Co-authored-by: hsoh-u <[email protected]> Co-authored-by: George McCabe <[email protected]> Co-authored-by: lisagoodrich <[email protected]> Co-authored-by: Stephen Herbener <[email protected]> fix #2389 main_v11.0 flowchart (#2391) fix definitions of G172 and G220 based on comments in NOAA-EMC/NCEPLIBS-w3emc#157. (#2405) fix #2380 main_v11.0 override (#2381) fix #2408 main_v11.0 empty config (#2409) fix #2390 main_v11.0 fix compiling hdf5 with zlib and handle NetCDF-C zip (#2403) fix #2415 main_v11.0 modulefiles (#2416) fix #2412 main_v11.0 climo (#2420) fix #2426 main_v11.0 buoy (#2432) fix #2437 main_v11.0 convert (#2438) fix for main_v11.0, for #2437, forgot one reference to the search_parent for a dictionary lookup. fix 2428 python from env main v11.0 (#2443) fix 2428 python csv input (#2450) fix #2452 main_v11.0 airnow (#2453) fix #2402 main_v11.0 sonarqube (First PR) (#2447) fix #2449 main_v11.0 pdf (#2465) fix 2428 python csv input (#2467) fix #2514 main_v11.0 clang (#2556) fix #2575 main_v11.0 python_convert (#2577) fix 2596 main v11.0 rpath compilation (#2600) fix 2596 main v11.0 rpath compilation (#2613) fix #2644 main_v11.0 percentile (#2645)
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…2770) Co-authored-by: MET Tools Test Account <[email protected]> Co-authored-by: Howard Soh <[email protected]> Co-authored-by: John Halley Gotway <[email protected]> Co-authored-by: jprestop <[email protected]> Co-authored-by: hsoh-u <[email protected]> Co-authored-by: George McCabe <[email protected]> Co-authored-by: lisagoodrich <[email protected]> Co-authored-by: Stephen Herbener <[email protected]> fix #2389 main_v11.0 flowchart (#2391) fix definitions of G172 and G220 based on comments in NOAA-EMC/NCEPLIBS-w3emc#157. (#2405) fix #2380 main_v11.0 override (#2381) fix #2408 main_v11.0 empty config (#2409) fix #2390 main_v11.0 fix compiling hdf5 with zlib and handle NetCDF-C zip (#2403) fix #2415 main_v11.0 modulefiles (#2416) fix #2412 main_v11.0 climo (#2420) fix #2426 main_v11.0 buoy (#2432) fix #2437 main_v11.0 convert (#2438) fix for main_v11.0, for #2437, forgot one reference to the search_parent for a dictionary lookup. fix 2428 python from env main v11.0 (#2443) fix 2428 python csv input (#2450) fix #2452 main_v11.0 airnow (#2453) fix #2402 main_v11.0 sonarqube (First PR) (#2447) fix #2449 main_v11.0 pdf (#2465) fix 2428 python csv input (#2467) fix #2514 main_v11.0 clang (#2556) fix #2575 main_v11.0 python_convert (#2577) fix 2596 main v11.0 rpath compilation (#2600) fix 2596 main v11.0 rpath compilation (#2613) fix #2644 main_v11.0 percentile (#2645)
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These changes reduce the number of
Blocker Bugsflagged by SonarQube from 22 down to 10. I had hoped to include fixes for the remaining 10 but the proposed fixes resulted in runtime errors from MODE. I'd like to include this PR in the MET-11.0.1-rc1 release, but plan to continue working on the remaining 10 prior to the actual MET-11.0.1 bugfix release on 2/28/23.Expected Differences
Do these changes introduce new tools, command line arguments, or configuration file options? [No]
If yes, please describe:
Do these changes modify the structure of existing or add new output data types (e.g. statistic line types or NetCDF variables)? [No]
If yes, please describe:
Pull Request Testing
Describe testing already performed for these changes:
Manually run the testing workflow and confirmed that all unit tests run without error. However, differences were flagged since the manual testing workflow diffs vs develop by default.
Recommend testing for the reviewer(s) to perform, including the location of input datasets, and any additional instructions:
Do these changes include sufficient documentation updates, ensuring that no errors or warnings exist in the build of the documentation? [Yes]
None needed.
Do these changes include sufficient testing updates? [Yes]
None needed.
Will this PR result in changes to the test suite? [No]
If yes, describe the new output and/or changes to the existing output:
Please complete this pull request review by [Mon 2/20/23].
Pull Request Checklist
See the METplus Workflow for details.
Select: Reviewer(s)
Select: Organization level software support Project or Repository level development cycle Project
Select: Milestone as the version that will include these changes